Abstract
Keywords
Background
Diagnostic testing
American College of Medical Genetics. Standards and Guidelines for Clinical Genetics Laboratories, Section E4, Prenatal Diagnosis, 2009 edn. http://www.acmg.net/StaticContent/SGs/Section_E_2011.pdf.
- Hahnemann J.M.
- Vejerslev L.O.
American College of Medical Genetics. Standards and Guidelines for Clinical Genetics Laboratories, Section E4, Prenatal Diagnosis, 2009 edn. http://www.acmg.net/StaticContent/SGs/Section_E_2011.pdf.
- Hahnemann J.M.
- Vejerslev L.O.
NIPS positive for: | Recommended laboratory test | Sample type | Result/recommended further testing | |
---|---|---|---|---|
T13, T18, T21, SCA, other aneuploidy, triploidy | Chromosome analysis | CVS | Normal or abnormal c/w NIPS | No further testing/consider CMA |
Mosaic | Follow-up amniocentesis with mosaicism studiesa | |||
AF | Normal or abnormal c/w NIPS or mosaic c/w NIPS | No further testing/consider CMA | ||
Smaller copy-number changes | CMA | CVS or AF | Negative or abnormal c/w NIPS | No further testing |
Abnormal not c/w NIPS | Further testing may be warranted dependent on specific finding |
Positive predictive value
Sources of discordant results
Cpm and tfm
American College of Medical Genetics. Standards and Guidelines for Clinical Genetics Laboratories, Section E4, Prenatal Diagnosis, 2009 edn. http://www.acmg.net/StaticContent/SGs/Section_E_2011.pdf.
- South S.T.
- Lee C.
- Lamb A.N.
- Higgins A.W.
- Kearney H.M.
Uniparental disomy of known imprinted chromosomes
Nips results with multiple aneuploidies or rare aneuploidies
Smaller copy-number changes
Newborns
NIPS positive for | Clinical phenotype | Recommended laboratory test | Result/recommended further testing |
---|---|---|---|
T13, T18, T21, other aneuploidy, triploidy | Normal | No testing needed | N/A |
Abnormal c/w NIPS | Blood chromosome analysis | Abnormal or mosaic c/w NIPS: no further testing; | |
Normal: additional cell counts or interphase FISH or CMA | |||
Abnormal not c/w NIPS | CMA | Further testing may be warranted depending on specific findings | |
SCA or discrepant sex chromosomes | Normal | Blood chromosome analysis | Abnormal or mosaic c/w NIPS: no further testing; |
Normal: no further testing | |||
Abnormal c/w NIPS or abnormal not c/w NIPS | Blood chromosome analysis | Abnormal or mosaic c/w NIPS: no further testing; | |
Normal: further testing may be warranted depending on the phenotype | |||
Smaller copy-number changes | Normal or abnormal | CMA | Abnormal c/w NIPS: parental studies, if indicated; |
Negative: no further testing; | |||
abnormal not c/w NIPS: | |||
Further testing may be warranted depending on specific findings |
Importance of genetic counseling
box 1 Points to consider following positive noninvasive screening results
- ●NIPS is a screening test. It is not a diagnostic test. Diagnostic testing is recommended as a follow-up for any positive NIPS result.
- ●The fetal contribution of the cfDNA studied by NIPS is of presumed placental origin and, therefore, NIPS results may not be representative of the fetus.
- ●Sources of discordant NIPS results include CPM, a resorbed or unrecognized twin, maternal chromosome abnormalities (either mosaic or nonmosaic), maternal malignancy, technical issues including low fetal fraction, or statistical errors.
- ●Mosaic CVS results should not be considered confirmation of a positive NIPS result. Follow-up amniocentesis is recommended.
- ●Chromosome analysis on follow-up amniotic fluid specimens with screening of additional cells, FISH, and/or CMA analyses may be considered to detect possible TFM in discordant cases. It should be understood that while the chance that TFM is present can be reduced to relatively low levels, it cannot be completely ruled out.
- ●CMA is recommended as follow-up testing for any smaller copy-number changes that are reported as positive by NIPS.
- ●Specific uniparental disomy analyses on CVS or amniotic fluid cells are recommended for any imprinted regions or chromosomes reportedly involved in positive NIPS cases with discordant results.
- ●For patients with screen-positive NIPS results, posttest access to genetic counseling by a genetics professional and accurate, balanced and up-to-date information are essential for guiding management.
- ●For unusual positive NIPS results (e.g., monosomy, or multiple or rare aneuploidies), an oncology consultation for possible maternal malignancy may be warranted.
Ethics declarations
Competing interests
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